Stanley Medical Research Institute NGS Data Repository contains high-quality next-generation sequencing (NGS) data from multiple brain regions of the Stanley Brain Collections.
Currently available NGS data to download
1. The Neuropathology Consortium (15 each schizophrenia, bipolar disorder, depression and controls)
- RNA-Seq data from prefrontal cortex
- RNA-Seq data from orbitofrontal cortex
- RNA-Seq data from hippocampus
2. The Array Collection (35 each schizophrenia, bipolar disorder and controls)
- RNA-Seq data from cingulate cortex
- RNA-Seq data from choroid plexus
- RNA-Seq data from hippocampus
3. The Stanley New Collection (19 each schizophrenia, bipolar disorder and controls)
- RNA-Seq data from choroid plexus
4. The Depression Collection (12 each depression with psychosis, depression without psychosis and controls)
- RNA-Seq data from prefrontal cortex
- RNA-Seq data from cingulate cortex
5. Combined Collections
- RNA-Seq data from liver
Demographic Data
Click following links to download demographic data
- The Neuropathology Consortium (15 each schizophrenia, bipolar disorder, depression and controls)
- The Array Collection (35 each schizophrenia, bipolar disorder and controls)
- The Stanley New Collection (19 each schizophrenia, bipolar disorder and controls)
- The Depression Collection (12 each depression with psychosis, depression without psychosis and controls)
- Combined tissue collections (73 liver samples from combined collection)
sFTP NGS raw data download method
Preparation
- Your username and password that you received from us.
- An SFTP client program (e.g., FileZilla).
- Enough disk space for your data.
Connection information
Host: sftp://143.248.30.179/
Username: your username
Password: your password
Port: 4000